You can find an updated list of my publications at my Google Scholar profile

2026

  • Sandin MM, Walde M, Henry N, Forn I, Simon N, Berney C, Massana R, Richter DJ (2026) OligoN-design: A simple and versatile tool to design specific probes and primers from large heterogeneous datasets. Mol. Ecol. Resour. 26(3): e70140. doi: 10.1111/1755-0998.70140 | PDF | GitHub | Bioconda | Zenodo | Preprint
  • Lescot M, Lezzoche N, Laux L, Romac S, Guilloux L, Chevillon E, Bodson C, Desnos C, Elineau A, Jalabert L, Llopis Monferrer N, Sandin MM, Vannier T, Vernette C, Villar E, Lombard F, Carlotti F, Irisson J-O, Guidi L, Bosse A, Testor P, Coppola L, Not F (2026) A holistic perspective on planktonic communities across the northwestern Mediterranean Sea. Front. Mar. Sci. 13:1755855. doi: 10.3389/fmars.2026.1755855 | PDF

2025

  • Sandin MM, Cohen P, Morlon H, Burki F (2025) Environmental phylogenetics supports a steady diversification of crown eukaryotes starting from the mid Proterozoic. bioRxiv 2025.12.12.693929. doi: 10.64898/2025.12.12.693929 | PDF | GitHub | Zenodo
  • Sandin MM, Renaudie J, Suzuki N, Not F (2025) Response to “Radiolarian evolution: Analytical challenges in estimating the diversity and origin of Nature’s stars”. EcoEvoRxiv doi: 10.32942/X2V359
  • Trubovitz S, Sandin MM, Caron DA (2025) Genetic variability in microbial eukaryotes reshapes marine biodiversity assessment in the age of amplicon sequencing. PLoS One 20(6): e032605. doi: 10.1371/journal.pone.0326053 | PDF | Zenodo
  • Sandin MM, Renaudie J, Suzuki N, Not F (2025) Extant diversity, biogeography, and evolutionary history of Radiolaria. Curr. Biol. 35, 2524–2538. doi: 10.1016/j.cub.2025.04.032 | PDF | GitHub | Zenodo | Preprint
  • Llopis Monferrer N, Romac S, Laget M, Nakamura Y, Biard T, Sandin MM (2025) Is the gelatinous matrix of Nassellaria (Radiolaria) a strategy for coping with oligotrophy? Environ. Microbiol. 27 (5), e70098. doi: 10.1111/1462-2920.70098 | PDF | Zenodo | Preprint

2022

  • Llopis-Monferrer N, Biard T, Sandin MM, Lombard F, Picheral M, Elineau A, Guidi L, Leynaert A, Tréguer PJ, Not F (2022) Siliceous Rhizaria abundances and diversity in the Mediterranean Sea assessed by combined imaging and metabarcoding approaches. Front. Mar. Sci. 9:895995. doi: 10.3389/fmars.2022.895995 | PDF | Figshare
  • Sandin MM, Romac S, Not F (2022) Intra-genomic rDNA gene variability of Nassellaria and Spumellaria (Rhizaria, Radiolaria) assessed by Sanger, MinION and Illumina sequencing. Environ Microbiol. 24(7):2979-2993. doi: 10.1111/1462-2920.16081 | PDF | Figshare | Preprint
  • Xiao L, Johansson S, Rughöft S, Burki F, Sandin MM, Tenje M, Behrendt L (2022) Photophysiological response of Symbiodiniaceae single cells to temperature stress. ISME J doi: 10.1038/s41396-022-01243-6 | PDF

2021

  • Burki F, Sandin MM, and Mahwash J (2021) Diversity and ecology of protists revealed by metabarcoding. Curr. Biol. 31-19: R1267-R1280. doi: 10.1016/j.cub.2021.07.066 | PDF
  • Sandin MM, Biard T, Romac S, O'Dogherty L, Suzuki N, Not F (2021) A Morpho-molecular Perspective on the Diversity and Evolution of Spumellaria (Radiolaria). Protist. 172, 125806. doi: 10.1016/j.protis.2021.125806 | PDF | Protocols.io | GitHub | Preprint

2020

  • Llopis-Monferrer N, Boltovskoy D, Tréguer P, Sandin MM, Not F, Leynaert A (2020) Estimating biogenic silica production of Rhizaria in the global ocean. Global Biogeochemical Cycles, 34, e2019GB006286. doi: 10.1029/2019GB006286 | PDF
  • Nakamura Y, Sandin MM, Suzuki N, Somiya R, Tuji A, Not F (2020) Phylogenetic revision of the order Entactinaria—Paleozoic relict Radiolaria (Rhizaria, SAR). Protist 171. doi: 10.1016/j.protis.2019.125712 | PDF

2019

  • Sandin MM. Diversity and Evolution of Nassellaria and Spumellaria (Radiolaria). Protistology. Sorbonne Université, 2019. PhD Thesis. HAL Id: tel-03137926 | PDF
  • Qui-minet ZN, Coudret J, Davoult D, Grall J, Sandin MM, Cariou T, Martin S (2019) Combined effects of global climate change and nutrient enrichment on the physiology of three temperate maerl species. Ecol. 00, 1–21. doi: 10.1002/ece3.5802 | PDF
  • Sandin MM, Pillet L, Biard T, Poirier C, Bigeard E, Romac S, Suzuki N, Not F (2019) Time Calibrated Morpho-molecular Classification of Nassellaria (Radiolaria). Protist 170, 187–208. doi: 10.1016/j.protis.2019.02.002 (Journal cover) | PDF | Protocols.io | Preprint

2018

  • Villar E, Dani V, Bigeard E, Linhart T, Sandin MM, Bachy C, Six C, Lombard F, Sabourault C, Not F (2018) Symbiont Chloroplasts Remain Active During Bleaching-Like Response Induced by Thermal Stress in Collozoum pelagicum (Collodaria, Retaria). Front. Mar. Sci. 5, 1–11. doi: 10.3389/fmars.2018.00387 | PDF | Preprint
  • Fernandez S, Sandin MM, Beaulieu PG, Clusa L, Martinez JL, Ardura A, García-Vázquez E (2018) Environmental DNA for freshwater fish monitoring: insights for conservation within a protected area. PeerJ 6 e4486. doi: 10.7717/peerj.4486X | PDF

2016

  • Sandin MM, Fernández C (2016) Changes in the structure and dynamics of marine assemblages dominated by Bifurcaria bifurcata and Cystoseira species over three decades (1977-2007). Estuar. Coast. Shelf Sci. 175, 46–56. doi: 10.1016/j.ecss.2016.03.015 | PDF